rs32359322 SNP Detail

Summary

• ID
  rs32359322
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:98304199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAG CTCCTGACAA AGGAAAAAAA
  M
  CACCATTTGA GAGCACAATG ACCCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46136415	mCV24171231	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	C
ss145478272	ENSMUSSNP3408885	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32359322					SNP	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:98304199 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
4930558N01Rik	RIKEN cDNA 4930558N01 gene			1159 bp upstream
Emsy	EMSY, BRCA2-interacting transcriptional repressor			Intron
				Noncoding-Transcript-Variant
Rr368380	regulatory region 368380			1662 bp upstream
Rr651647	regulatory region 651647			669 bp proximal
Rr651648	regulatory region 651648			1170 bp proximal
Rr651649	regulatory region 651649			1330 bp proximal
Rr651650	regulatory region 651650			1544 bp proximal
Rr651651	regulatory region 651651			1618 bp proximal
Rr651652	regulatory region 651652			1938 bp proximal
Tssr68028	transcription start site region 68028			825 bp upstream
Tssr68029	transcription start site region 68029			1153 bp upstream
Tssr68030	transcription start site region 68030			1182 bp upstream
Tssr68031	transcription start site region 68031			1909 bp upstream
Tssr73641	transcription start site region 73641			1523 bp downstream
Tssr73642	transcription start site region 73642			1538 bp downstream
Tssr73643	transcription start site region 73643			1800 bp downstream