rs32328551 SNP Detail

Summary

• ID
  rs32328551
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:118286028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGA GTGTCACTCA CCAGAGAGCT
  S
  TGTGTGCAGA AGGGAGGTGT GGGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45634769	mCV23178351	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss147308082	ENSMUSSNP1762779	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321283184	CHEV_4_118101436	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32328551					SNP	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118286028 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi14684	CpG island 14684			783 bp distal
Elovl1	ELOVL fatty acid elongase 1			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr598393	regulatory region 598393			696 bp distal
Rr598394	regulatory region 598394			562 bp distal
Rr598395	regulatory region 598395			380 bp proximal
Rr598396	regulatory region 598396			881 bp proximal
Tssr38657	transcription start site region 38657			1933 bp downstream
Tssr38658	transcription start site region 38658			637 bp downstream
Tssr38659	transcription start site region 38659			15 bp downstream
Tssr38660	transcription start site region 38660			850 bp upstream
Tssr38661	transcription start site region 38661			871 bp upstream
Tssr38662	transcription start site region 38662			910 bp upstream