rs32323994 SNP Detail

Summary

• ID
  rs32323994
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101352593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGATGGCC AAACTAGTGA
  GGCAAGTGCT GTACACCTGC AGAGTCCAGA TATACAATTT TTTTTTAAAA AAATTACATT
  TATTTATTCT TTTCTTCTTA GTATTGCCCT GGCTGTTTTG AGACAAGGTC TTCCTATGCA
  GCCCAGGCTG GTCTTGCATT AGTCATCCTC CTGCCTCAGC TTCTCCAGAA CTAGGATTGT
  W
  GGTGAGTCCT GCCAAGCCAA GCACACTGAG TTCTGTCTGA AGTCGGTTGG GGGTATTTCG
  GAGGCTGTAA TTTCTGGTCT CTTTATTCAG CTTATTGATC TATGTGCCTT GTCCCTTTGC
  AGACACCACA CTGTTTCATT ACAGCACCAA GAACACATTG GGACCTTACA TGTTTACTGT
  GAGCACAGTC GCACTCTGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45634803	mCV22691423	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss321230244	CHEV_4_101168001	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32323994					SNP	A	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101352593 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14501	CpG island 14501	739 bp proximal
Dnajc6	DnaJ heat shock protein family (Hsp40) member C6	1235 bp upstream
Rr596165	regulatory region 596165	1501 bp distal
Rr596166	regulatory region 596166	762 bp proximal
Rr596167	regulatory region 596167	1263 bp proximal
Tssr37995	transcription start site region 37995	1149 bp upstream
Tssr37996	transcription start site region 37996	1280 bp upstream