rs32278654 SNP Detail

Summary

• ID
  rs32278654
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:88132934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGGGAATG AAAAAAATAT AATGAATATT TATTATATAA
  AAGAAATAAT TTAGGTTAGC TTTCACAGTA GGCGCATAAG CCAGGATGTT GCTTAATCAC
  Y
  GGAGAGGCAG AGAATCCTAT ATCTGCGCAG TTCACAAAAC AGGGTACTTC AGCTGTCTCG
  GCTGACTCTG AAGGCCTGGG GCCTTACTGC ATAGCTAGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45628924	mCV23997612	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss146935162	ENSMUSSNP6914565	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss321202874	CHEV_4_87860601	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32278654					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88132934 () rs orientation: forward

Symbol	Name	Function Class
Focad	focadhesin	Intron
Rr594975	regulatory region 594975	308 bp distal