rs32233019 SNP Detail

Summary

• ID
  rs32233019
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115594686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGA GTAAGAGGGA TGGAGTCTTT
  S
  AAGAACTTTT CAGAAGGTGG AGCCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45623422	mCV24655213	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss321276234	CHEV_4_115410094	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs32233019					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115594686 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14611	CpG island 14611	within coordinates
Cpgi14612	CpG island 14612	1189 bp proximal
Efcab14	EF-hand calcium binding domain 14	255 bp upstream
Rr597763	regulatory region 597763	within coordinates
Rr597764	regulatory region 597764	6 bp proximal
Rr597765	regulatory region 597765	192 bp proximal
Rr597766	regulatory region 597766	471 bp proximal
Tssr38464	transcription start site region 38464	249 bp upstream
Tssr38465	transcription start site region 38465	265 bp upstream
Tssr38466	transcription start site region 38466	334 bp upstream
Tssr38467	transcription start site region 38467	924 bp upstream