rs32208370 SNP Detail

Summary

• ID
  rs32208370
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106696456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACACGCCGC CCCCCGCCGC CGGCCCAGCC CCGGGGCTCC
  CGCGCTGCGC AGCCCGCTCG GTGCGGACTT GCTGCTGCCT CCCACCCCTC CCCGCACAAG
  S
  CACTTCGCGG GAAAAGGCTG GTTTTGCCTT TTTATTTTTC TTCAGAGGTT GAGGCAGACA
  TTGGGTCCAG GCTCTACGCA CGCACCTACT CGTCTGTGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45620166	mCV22874296	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss321247402	CHEV_4_106511864	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32208370					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106696456 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14533	CpG island 14533	1007 bp distal
Cpgi14534	CpG island 14534	within coordinates
Gm12746	predicted gene 12746	1751 bp downstream
Gm31125	predicted gene, 31125	19 bp downstream
Gm57074	predicted gene, 57074	within coordinates
Gm69615	predicted gene, 69615	1038 bp upstream
Rr376971	regulatory region 376971	within coordinates
Rr596834	regulatory region 596834	1991 bp distal
Rr596835	regulatory region 596835	1685 bp distal
Rr596836	regulatory region 596836	1049 bp distal
Rr596837	regulatory region 596837	1082 bp distal
Rr596838	regulatory region 596838	548 bp distal
Rr596839	regulatory region 596839	191 bp distal
Rr596840	regulatory region 596840	453 bp proximal
Rr596841	regulatory region 596841	837 bp proximal
Rr596842	regulatory region 596842	989 bp proximal
Rr596843	regulatory region 596843	1407 bp proximal
Tssr38191	transcription start site region 38191	948 bp upstream
Tssr42648	transcription start site region 42648	762 bp downstream