rs32207748 SNP Detail

Summary

• ID
  rs32207748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138918064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACCC ACTGAGCCAG CCCATCCACC
  Y
  TGTTTTTTGA CCCAGCGTCT CTCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45619772	mCV23716330	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss147667591	ENSMUSSNP5000249	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
ss321380200	CHEV_4_138746668	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32207748					SNP	C	C	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138918064 () rs orientation: forward

Symbol	Name	Function Class
9530077C14Rik	RIKEN cDNA 9530077C14 gene	1099 bp downstream
Cpgi15162	CpG island 15162	1592 bp proximal
Rr377279	regulatory region 377279	within coordinates
Rr603133	regulatory region 603133	883 bp proximal
Rr603134	regulatory region 603134	1954 bp proximal
Tssr44214	transcription start site region 44214	1702 bp downstream
Tssr44215	transcription start site region 44215	1861 bp downstream
Tssr44216	transcription start site region 44216	1888 bp downstream
Tssr44217	transcription start site region 44217	1911 bp downstream