rs32159764 SNP Detail

Summary

• ID
  rs32159764
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119238443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGATGTGG GAGGCAGGAG CAGGAGGGTA GCTTGGCTGG
  CTGAAACCTA TCTTAGAGCA AAGTCTCATC TTTTATTTTC ATTTCTTACC TCATTAAAAT
  M
  TTGTACTTTA ATTGTCTCTT GGTCTTTCAT TCTGCTGTCT CTTCAGTCCT CCTGGTTTAA
  TGGTTAATGA TAACTCGGGC TCTAAGATGG AAATCTCAA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45615085	mCV25417271	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss147328380	ENSMUSSNP3357182	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32159764					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119238443 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccdc30	coiled-coil domain containing 30			Coding-NonSynonymous
				Intron
				Noncoding-Transcript-Variant
Rr598572	regulatory region 598572			414 bp proximal