rs32112104 SNP Detail

Summary

• ID
  rs32112104
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95400601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAACTTAT TTTTATAGAT
  GAAAACTCAG GCTAACCTAG TGAGTATGAT CTTGGAATGC CCATGATCAA CCACTTAAAG
  ATCAAAGTAT TATATGCTGT GTGCTTCGTA GCTGTGAGTG TTGCGAGTGC GAATGTGCTT
  TCCGACGGGT TCTCCTTGCT GGGCACCAGA ACAAAGAGGC TGTGTGCTAG AAGTGGACCG
  M
  GGCTCTGTCA GGACAGCATG CGAGGTGTGC TTGTGCATGC TTGTGTGCAG TCCTTCGTGT
  AGGCCAGTGA GCTGGGGGGG TTATTGGGGG TAGGGACTCT GCTGTTTGTT TTCATACAAT
  CTCTCCTGCT AAGTTGATGC TCCCCTGATC CAGCTCAGCC TGGGGGTGGG GGTGGGGGCA
  GGACACAGAT TTCTGGTCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46168256	mCV25273829	ABI	CRAMUS_MOUSE	f	SNP	A	C	C					C		C
ss47626895	NES11436984	PERLEGEN	MM_PANEL2	f	SNP	A		C	A	C	A	C		C	C	C	C	C	C	A	C	C
ss145632639	ENSMUSSNP857351	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32112104					SNP	A	C	C	A	C	A	C	C	C	C	C	C	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47626895	NES11436984	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95400601 () rs orientation: forward

Symbol	Name	Function Class
Arl2bp	ADP-ribosylation factor-like 2 binding protein	mRNA-UTR
Gm45767	predicted gene 45767	1633 bp upstream
Pllp	plasma membrane proteolipid	922 bp downstream