rs32111779 SNP Detail

Summary

• ID
  rs32111779
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112358112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGAGGGA AAACCTGAGG
  CTGGGGCTTG GGGAGGGCAG TTGCCGGCTC TGCGTCTCTC AAACGCTTCC AGAGTTTCCG
  TCCTCAGATG CACTTGCTAC AGCTCCTTGC CCCCACCCAC CCATGCCAGA CCCCACTCAA
  ATTCCTGAAA CCCTGGAACC CACCGCTGCC CCCATAAGAG CAGCCCCAGA GGTAGGCAGA
  R
  GGTTCAGTCC CAGCCCAGTA GAGAGGGGGC AGAGGATTTG TGTGATGCTG CCATCTGCTG
  GCCACTCCTG TGAACTGCAG CCAGCACGTA GCGACTCCCC AACAGGCCAC CCAAGGAAGA
  GACCTACAGA TTTCCTGCTC CACTTCGGAA AATAGTGACT TTCAAGAGCG TGGCTTTATA
  TCTCTCTGTG GGACCCTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321645075	CHEV_5_112639266	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32111779					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112358112 () rs orientation: forward

Symbol	Name	Function Class
1700028D13Rik	RIKEN cDNA 1700028D13 gene	244 bp downstream
Rr617283	regulatory region 617283	within coordinates
Rr617284	regulatory region 617284	45 bp proximal
Rr617285	regulatory region 617285	614 bp proximal