rs32107869 SNP Detail

Summary

• ID
  rs32107869
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95404043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACATACTTA CAGAGGCAGC
  TGAGCGCTGG TTATATGGCC GGGAGCCCCT CAGGGATGTC AGATCGACCG CCGCTGCACA
  GGCGATAAAG GCAGTAATGT AGAGAACCGT GGCAGCGACA AAAAAGATCA GTAACTGTAG
  GGGGAAGGGC GAGAGGCATA AGCATCCACA AAGAACATCA CCACCTTGAA GCCCTGACGG
  R
  AAGGCCTGAA GTGTTGGGAC GGTGCCACCA CAACGAGCCA CTTGCCTCTA ACCAGCTAAA
  GAAATGCCAT CTCTTGTGTG GCACACGCCA TGCCCATGTT CTTCCTATGA CCACATCAGC
  ACTTGGCCAT GTGCCTGGCC CTCACATCCC TCTGCCCACC AGTGGGAGAA ATCTATGACT
  CCCTTATACT ATCCTAAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47626940	NES11436907	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32107869					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47626940	NES11436907	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95404043 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm45767	predicted gene 45767			within coordinates
Pllp	plasma membrane proteolipid			Intron
				Noncoding-Transcript-Variant
Rr668025	regulatory region 668025			669 bp proximal
Tssr82509	transcription start site region 82509			1310 bp downstream