rs31992856 SNP Detail

Summary

• ID
  rs31992856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119295007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGACTTTGAA CTTCTGATCC TCCTGCTCCC ACCACTCTTC
  CTTCCAGTGC TGAGATTTCA GGCCAAAACT ACATTCCCAA GATATGTGTT GTTGGGGATT
  R
  AACCCCGGTC TTAATTCGGT AGGCCAACCC TCTACCAATT CATCTACACC CCAGCCCTCT
  TTCTTGTCTC TGCTCCTCTG TATGTATCTA CATCAGTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45595001	mCV25416712	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147329943	ENSMUSSNP3850797	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31992856					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119295007 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr598588	regulatory region 598588			954 bp proximal
Zmynd12	zinc finger, MYND domain containing 12			Intron
				Noncoding-Transcript-Variant