rs31855472 SNP Detail

Summary

• ID
  rs31855472
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:8756231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAC TGTCCTGTAG CAAGTGTCCA
  S
  AGTTACCTGT CGCCAAGTTA GCTTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45578179	mCV22979164	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss145983489	ENSMUSSNP6100200	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss321038177	CHEV_4_8683378	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31855472					SNP	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:8756231 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Chd7	chromodomain helicase DNA binding protein 7			Intron
				Noncoding-Transcript-Variant
Rr588583	regulatory region 588583			477 bp distal
Rr588584	regulatory region 588584			1908 bp proximal