rs31817441 SNP Detail

Summary

• ID
  rs31817441
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:88131221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTG TGTATGTGTG TTTGTATGTA
  Y
  GTATGTATGT GAAACATGAG TAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45574308	mCV23997886	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss146935148	ENSMUSSNP2575859	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31817441					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88131221 () rs orientation: forward

Symbol	Name	Function Class
Focad	focadhesin	Intron
Rr594974	regulatory region 594974	1135 bp distal
Rr594975	regulatory region 594975	945 bp proximal