rs31748345 SNP Detail

Summary

• ID
  rs31748345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106694707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC AATATAACAA CAACGACGAC
  R
  ACGACGACAA TGATTCATTC TACCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45566579	mCV22874306	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147172720	ENSMUSSNP3688742	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31748345					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106694707 () rs orientation: forward

Symbol	Name	Function Class
Gm31125	predicted gene, 31125	1768 bp downstream
Gm57074	predicted gene, 57074	54 bp upstream
Gm69615	predicted gene, 69615	30 bp downstream
Rr376971	regulatory region 376971	931 bp upstream
Rr596834	regulatory region 596834	242 bp distal
Rr596835	regulatory region 596835	within coordinates
Rr596836	regulatory region 596836	65 bp proximal
Rr596837	regulatory region 596837	646 bp proximal
Rr596838	regulatory region 596838	701 bp proximal
Rr596839	regulatory region 596839	1537 bp proximal
Tssr38190	transcription start site region 38190	605 bp downstream