rs31675127 SNP Detail

Summary

• ID
  rs31675127
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121437549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCAATTACA AGGAAATGTT ATCATTCTCT TAACTAAGAA
  ACTGTATGGA GGTTGTGTGT GTGCAAATGT ATGTGTGTAG TGTATAAATG TGTGTATTGT
  K
  CACAGGTATA TGTGTGTATA CATGTATGCA TGTGTGTATG TGTGTTTTTA TATGTATGTG
  TGTTAATGTA CATGTGTTAT ATGTATTGCC TACAGGTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45558848	mCV23896150	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss135725829	ENSMUSSNP1239457	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss320904493	CHEV_3_121346818	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31675127					SNP	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121437549 () rs orientation: forward

Symbol	Name	Function Class
A730020M07Rik	RIKEN cDNA A730020M07 gene	within coordinates
Rr584136	regulatory region 584136	506 bp distal
Rr584137	regulatory region 584137	87 bp distal
Rr584138	regulatory region 584138	1425 bp proximal