rs31671526 SNP Detail

Summary

• ID
  rs31671526
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95856443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTTACAAAGA CTTACTGACT GACTTTTAAC TTAAGAGTAT ATGTGAGCCT TCAGATCCCT
  TGGAACAAAG ATTTTTTTGG CTGTGTAAGC TGGTAACTCA CCTGAGCCTC TGTAAGAGCA
  GCAAGTGCTC CTAACTGCAG AGCCACCTTC AGCTCAAGTT CAAGTTGTTC AAGTCTTAGG
  GCTTCTTAAC CTGCTAAGAC CCTATAGTAG GGTAACCGTG ACTAAGAAAG ACGAAGGAAA
  GTATGTATTT CAGTTAAGTT CTTGAATATT TCCCTGTGTG TGTGTGTGTG TGTGTGTGTG
  W
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGCATCATT TGGATGCCTC CTTAGAGAAA
  TGTGCATCCA CCATTAAATA CATAGACTGT AAGAGGGCCA TAATCTCAAC CCTACGCACT
  GCCTATGACT GACTTCCTGG GCAGGGTCAC TCCACAGGGC GGAGTGGGTT CTCCACCCAG
  AGAAAAGAGC ATACAATCTT TGATAGCGAC ATATGATCGG TGTTGGCTTT TACAAACTTC
  ACACTAGAGA ACATGAAATC GAGGTTTTGT TTTGTTTTAA GCAAAAACAA CCCTCAATGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45558687	mCV25061954	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss135513176	ENSMUSSNP2412609	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31671526					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95856443 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	1744 bp downstream
Cpgi13530	CpG island 13530	1569 bp proximal
Gm56819	predicted gene, 56819	874 bp downstream
Rr375411	regulatory region 375411	1319 bp upstream
Rr581095	regulatory region 581095	1308 bp proximal
Tssr30663	transcription start site region 30663	1927 bp upstream
Tssr34570	transcription start site region 34570	1886 bp downstream