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rs31671526 SNP Detail
Summary
  • ID
    rs31671526
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr3:95856443 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                                     
    GTTACAAAGA CTTACTGACT GACTTTTAAC TTAAGAGTAT ATGTGAGCCT TCAGATCCCT
    TGGAACAAAG ATTTTTTTGG CTGTGTAAGC TGGTAACTCA CCTGAGCCTC TGTAAGAGCA
    GCAAGTGCTC CTAACTGCAG AGCCACCTTC AGCTCAAGTT CAAGTTGTTC AAGTCTTAGG
    GCTTCTTAAC CTGCTAAGAC CCTATAGTAG GGTAACCGTG ACTAAGAAAG ACGAAGGAAA
    GTATGTATTT CAGTTAAGTT CTTGAATATT TCCCTGTGTG TGTGTGTGTG TGTGTGTGTG
    W
    GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGCATCATT TGGATGCCTC CTTAGAGAAA
    TGTGCATCCA CCATTAAATA CATAGACTGT AAGAGGGCCA TAATCTCAAC CCTACGCACT
    GCCTATGACT GACTTCCTGG GCAGGGTCAC TCCACAGGGC GGAGTGGGTT CTCCACCCAG
    AGAAAAGAGC ATACAATCTT TGATAGCGAC ATATGATCGG TGTTGGCTTT TACAAACTTC
    ACACTAGAGA ACATGAAATC GAGGTTTTGT TTTGTTTTAA GCAAAAACAA CCCTCAATGT
                                                                     
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss45558687 mCV25061954 ABI CRAMUS_MOUSE f SNP A T T
ss135513176 ENSMUSSNP2412609 ENSEMBL ENSEMBL_Sanger f SNP A T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs31671526 SNP A T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:95856443 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Anp32e acidic nuclear phosphoprotein 32 family member E 1744 bp downstream
Cpgi13530 CpG island 13530 1569 bp proximal
Gm56819 predicted gene, 56819 874 bp downstream
Rr375411 regulatory region 375411 1319 bp upstream
Rr581095 regulatory region 581095 1308 bp proximal
Tssr30663 transcription start site region 30663 1927 bp upstream
Tssr34570 transcription start site region 34570 1886 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory