rs31670757 SNP Detail

Summary

• ID
  rs31670757
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:41115527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGACATGG TGTAGGAAAC
  TGAACTTGGG TTCTCTGAAG ATCTGTGCTC TTATCCACTG AGCCATCTCT CCAACCCCAC
  ATGTCTTCTT TCTTTGAAAC ATCTTACATT TTATTCAAAT ACCTGCTCAG ACCTCTACAG
  TCTATTCCAA CTAAAATAAG ATTTTCTTCA CCCCTGACTG TTTTCTTGGT TGTTCTTTTT
  Y
  CCCCCCCCCC AGAGTACTAG CTCAAAGGTG ATTTGTTGTT GTTAAAAATG TAAGGCTTCA
  CACATGAGCT GGACCTACAG CCCCTCCACC CACCCAAACA CATATGTAAC AGATGCATAT
  TCAGGTCCTC CAACAACTGG AGTGGCGCTG TCCCTGACTC TGTTGCCTGC CTGTGGATCC
  TGTTCCCCTA ACTGGGTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45558376	mCV23265847	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss135040570	ENSMUSSNP5908345	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31670757					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:41115527 () rs orientation: forward

Symbol	Name	Function Class
Gm40038	predicted gene, 40038	within coordinates
Gm64942	predicted gene, 64942	within coordinates
Rr575902	regulatory region 575902	1966 bp distal
Rr575903	regulatory region 575903	237 bp distal