rs31666128 SNP Detail

Summary

• ID
  rs31666128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119339160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGTGTGC ATTGAAGAAG
  GTTATCAAAC ATACCTGTGA CTTTAGCTGT CATTTAGCAA CACTTCCCAA ACAACCTTTA
  CCATAACATC TTATACTATT TAAAATAAAA TGGACTGACA AAAAAATGTA TTTCTAAATG
  GTAGGCTTTG TTAAGAACAG TAAAACGTAA AAAAATATAC CAAATTATAC CCTAAAGGAC
  Y
  TTTGTTTTAG TCCAGCTAAA GGAATGAGGA ATTCAAAGCC CCAGATACAC AGACCTTCAT
  CAGGGACAGC AGATGTTACC TGGGGGGGGG GGGGGGGGGG GGGGGAATCA GTCCTTAAAT
  ATGACTATTT TTTACTTAAT GTTCTTGTTG ATACAAAGAA TCACAGTTTT ATGTCTTATC
  CTAAAATGCC TCCCCTCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss48075487	NES11873903	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs31666128					SNP	T	T	C	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48075487	NES11873903	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119339160 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637644	regulatory region 637644			601 bp distal