rs31666124 SNP Detail

Summary

• ID
  rs31666124
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119338499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATCAGTTT CATATTCTAT
  TCAGATCAAA TAAAATGTAA CTATAACTAA TCTAAGTAAT GACTGAAAAG AAACCTGCTC
  AAACTTTCTA AACACCTTGC TCTTGCTGCT TGTTGGGATA CTGTGTATCT TCTATAGCAA
  TTCTTGCCTT GCCTTTGAGG CCACTGTGTC AAGACCTAGG GAGGAGGCAG GCAAGAGTTA
  Y
  ATAGCTGCCT GGAAGGGGCA GAGGAAGGGT CATGAAGTCC AGACTAGCCT GGGATACTGT
  AAGACCCTAT CTCAAAACAA AACTCTAGGA GAGAAAAGAT GAGTTGGTTT TAACAAAGTC
  ACAGCACACG TTAGGATTAT CAAAGGGTAA ACCAATAAGA AATCATTACT GAAAATCCGA
  GGGAGAGAAA TTCTATCATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48075483	NES11873910	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31666124					SNP	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48075483	NES11873910	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119338499 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637644	regulatory region 637644			within coordinates