rs31665935 SNP Detail

Summary

• ID
  rs31665935
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127655265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAATGTC TCTTAGAGCT
  TGAAAATGAA ATGCCTGGGG AGCACTGTAC CGGGCCAAGC CCAGCTCTAT CTGAACATCT
  CATAAATGTC CCGACAAGCA TAGCCTGACA GCGAAGAAAA TGTAGGAGAA CCAGTTCTGA
  AATGCAGTGA GACGGAATAA AGGAAAGCTC AGGCTCAGCT GCTCACGGAA GTTCACATGC
  R
  CAAGCATCCT AAGCAAGGAG CGACTGTTCG GGCATATGTA TGTACTGTTC GGGCGTATGT
  AGAAATGTGT GTGTGCAGAA AGGAAGTAGG AAGGGGTGGG CCAGACTGAA AATACTGATG
  GTCCACATAG AACACTTTGA ATGGCAGAGT AAGACTGATC AGACAACTCA AAGAAATATA
  TTACATATGC AACATGCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45557832	mCV24302373	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135873389	ENSMUSSNP2918251	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320957596	CHEV_3_127564534	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31665935					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127655265 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Gm43652	predicted gene 43652	1568 bp downstream
Rr584887	regulatory region 584887	within coordinates
Rr584888	regulatory region 584888	897 bp proximal
Tssr31614	transcription start site region 31614	1 bp downstream