rs31665785 SNP Detail

Summary

• ID
  rs31665785
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119391833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATGATGG AGCTGGGTGT
  GGTGATGCAC GCCCAGTAAC TACGGAGACA GAGACGTGGA GTCCCGAGCT TCCAGCCAGG
  GCTATTAGTG TGACCTTGTC TGAAAACCTT CTATGTATCA GAGGAGTAAA TGAAATGACT
  GTGCACTCCT GTTGCCTTAC AGACGATTCC ACTAGGCTCC TCCCAATAGC GACCTAACAA
  Y
  ACCTTGTGTC AACACCGGCC GCCATTGCCT GAGGTGGGGT ATATGTCTTG ATACCCAACT
  CTCTCACTCT ATCCCCTCTC CTGTTCCCAC AAGTTCTAGT CCAGCCTTGC TCTCTTTTTG
  CCCTTCTCTA TCCCTGCTTT CTCTGCCCTC GTGGCTCTGT CTGCCTCTAC CCCTTCTCTA
  GGCCCCTGCT CCCTTCCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48075665	NES11872250	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31665785					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48075665	NES11872250	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119391833 () rs orientation: forward

Symbol	Name	Function Class
Adipor2	adiponectin receptor 2	Intron
Rr637669	regulatory region 637669	within coordinates