rs31664751 SNP Detail

Summary

• ID
  rs31664751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119337065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAGAAAG AAAACAAGGT
  GGGGTGGGGA AGATAATCTC TCATTCATCT AAGGACCACA ATCCAACAAG AAGCCAGAGA
  GGACAGTTAC CTCTTAAGAG TTAAGCTGAC CTGCTACTTA CGAAGTTCTC ACACATACGC
  TTAGAGGTGC TTTCAAAGCT CTACTTTACA TCTGTTTATG GATGCTCAAG AATCCTGTGC
  Y
  GTTCCTCTGG TCCTTACTAG CTGTCCCAGT ACATCACTGT CACAAACTCC ATACCTAGCC
  ATTTGCTTTG TTTGAGAATG GGTCTCAGTA CTATGTAGTC CTGGCTAGCC TGGAGTTCAC
  GCTGCATAGA CCAGGCTGGG CCTCTGTCTC TTGAGTGCTG GGATTAAAAG CGTGTGGCCA
  CCACTATAGC TTTTACACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48075479	NES11873938	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31664751					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48075479	NES11873938	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119337065 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637644	regulatory region 637644			539 bp proximal
Tssr62709	transcription start site region 62709			587 bp upstream