rs31663287 SNP Detail

Summary

• ID
  rs31663287
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119354190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAGTGAA CCCAGGTTCA
  ATTCCCAGAA CCCACATGGC AGCTCACAAC TGTCTGTTAA CTCAAGTTAC AGTGGATCCC
  ACACCCTCAC ATCGCAGACA AAACACCAAT GCACATTTAA AAAAAAAAAA AACAAAAAAC
  TCATTTTTAA AAAGAAAGAA ATCTGCGTTT AGCAGACTCC TTGCCAGGCC CTCTTATCTT
  R
  CTACTTCCAA GCTGTCCTGG TTTCCAAGGG TTTGGGTGAG TGTCTCAGGC TGCATCTCCT
  TTAGTTTATG TTACTTTCAA CTAATTAACC TTGGTAATTT TACAGACTCA ACTCTTAGGT
  CAAATTAGAA AATTATCCTA TCATTGTTTA TTTAAAATAA TCTCTTTGTC CTTTTCTTTC
  CTCCCTCTGG AACTCACATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48075551	NES11873446	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31663287					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48075551	NES11873446	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119354190 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637649	regulatory region 637649			1996 bp distal
Rr637650	regulatory region 637650			1958 bp distal
Rr637651	regulatory region 637651			406 bp proximal
Rr637652	regulatory region 637652			419 bp proximal
Rr637653	regulatory region 637653			1506 bp proximal