About   Help   FAQ
rs31641841 SNP Detail
Summary
  • ID
    rs31641841
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:95856184 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TGACT GACTTTTAAC TTAAGAGTAT
    R
    TGTGAGCCTT CAGATCCCTT GGAAC                                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
ss45555804 mCV25061944 ABI CRAMUS_MOUSE f SNP A G G
ss46778150 NES10734474 PERLEGEN MM_PANEL2 f SNP A A G G G G G A G G G G G
ss135513173 ENSMUSSNP4324858 ENSEMBL ENSEMBL_Sanger f SNP A G
ss320841246 CHEV_3_95752795 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
rs31641841 SNP A A A G G G G G G A G G G G G A G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46778150 NES10734474 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:95856184 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Anp32e acidic nuclear phosphoprotein 32 family member E 1485 bp downstream
Cpgi13530 CpG island 13530 1828 bp proximal
Gm56819 predicted gene, 56819 1133 bp downstream
Rr375411 regulatory region 375411 1578 bp upstream
Rr581095 regulatory region 581095 1567 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory