rs31619943 SNP Detail

Summary

• ID
  rs31619943
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:62300173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAACAATGG CTGGGGCTTG GTTGCACTGC AGTATTTCAT
  CTGCCTTGCA TTTGCAGCTG TGGATTTTAA ACCATTTCAT GGAATTTTCT TTTCTTTTCT
  Y
  TTCTTTTTTT TTTTGACTCT GCCAGTATGA GTAAAACAAG CAAGACCACC CAGTTTACTC
  TTGGCAGTGG AAAAGATCTT AATGTAAACT TCACAATCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45552631	mCV22845644	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss135231346	ENSMUSSNP1883511	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31619943					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:62300173 () rs orientation: forward

Symbol	Name	Function Class
Arhgef26	Rho guanine nucleotide exchange factor 26	Intron
Rr375083	regulatory region 375083	986 bp downstream
Rr577516	regulatory region 577516	1595 bp proximal