rs31596151 SNP Detail

Summary

• ID
  rs31596151
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162692569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCC TGGAGCATGT CATAGTTTTA
  R
  CGTGAGACAG GGCTGTGTTC CATTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45048975	mCV23041828	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145945111	ENSMUSSNP6476405	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31596151					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162692569 () rs orientation: forward

Symbol	Name	Function Class
Fmo1	flavin containing monooxygenase 1	Intron
Rr422026	regulatory region 422026	445 bp distal
Rr422027	regulatory region 422027	within coordinates
Rr422028	regulatory region 422028	1456 bp proximal
Rr422029	regulatory region 422029	1600 bp proximal
Tssr14673	transcription start site region 14673	1359 bp downstream
Tssr14674	transcription start site region 14674	1425 bp downstream
Tssr14675	transcription start site region 14675	1440 bp downstream
Tssr14676	transcription start site region 14676	1463 bp downstream
Tssr14677	transcription start site region 14677	1483 bp downstream
Tssr14678	transcription start site region 14678	1502 bp downstream