rs31557098 SNP Detail

Summary

• ID
  rs31557098
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154426877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCCAAT CAAGAAGAGT
  GACTCTAATA AAAACAGCCA CAAATATAAC AACAGATTTG GTGATTACAA GTTTTAAGCC
  TCCCCAATAA ACAGTGCCGC TGGAACATCA GCTTTAAGTT AAAGTAAAAT AAACCATGGC
  TCTCAGTTTG TGGAGAACTG TTATCATTTT TACAGATTTG TGGAATGTGG GAATTCACTC
  R
  GGTGTTTCTC AGTCACATCC AGCATTCCTT CCCATCTCTT CGTAGATGAG GGAGGGAAGA
  TGCCCCTGAG CTGGGGTGGC TTTTGAAGGA TATCCCTATA GCTCTGGCTA GGTGGGGTGG
  GGACTATGGT TCAATGCTAC CTCAGCTTTC AGTAGCCAAA GTGCCAACCT TTTCCTGAAG
  GGAAAGGTAT GAATTCCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
ss45546448	mCV22840627	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss136118380	ENSMUSSNP1336065	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
rs31557098					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154426877 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	1885 bp proximal