rs31497460 SNP Detail

Summary

• ID
  rs31497460
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34828038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGATCGT ATTTTATTCA
  GGGAACGTGT CCAGGTAGCA GACAGTAAAG CACCGCCCCC CTCACGGGAG AGGCACTTTC
  CTCCAGGTTG TCTTTTAGTC ATAAGTCTGG GTTGTTCTCA CCATGAATGC GCATGACAGG
  CAGGCTGACG AGGTCTTGGC AGCCCTTAGC CGGAGGCGGC TCTGGCGGAG AGGAAGCGAG
  Y
  TTTCCTCTCC CCCAGGCCGA CCCTCCTCTG CCTTCCTCAC ATTCTTCCAC TGTCTGGGTC
  ATGCTGGGAC TGGCCCTGCA GTCTCAGGCA TCTTGGGCTC TGGCATTGTC CCCAGGTTAG
  CGTCTCTCAC CCAGGTGTCC TTGAGGAAGC TCCTTGGAGA CTTGTTTTCC TCCTGCCTTG
  GTGAAGCTCT TGATCCTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45540872	mCV24299075	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31497460					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34828038 () rs orientation: forward

Symbol	Name	Function Class
Gm38509	predicted gene, 38509	within coordinates
Gm65307	predicted gene, 65307	within coordinates
Rr575186	regulatory region 575186	within coordinates
Rr575187	regulatory region 575187	269 bp proximal