rs31187447 SNP Detail

Summary

• ID
  rs31187447
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128646206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTATTTTCTT CATATGCTTT CAATATTTGG ATCCCCTTGG GACATTGTTG CAATGAAAAT
  TATTTCTAAA TGACTGCCTA GGAGCAGTAT ACAAGGGTGA CGGCATTATA AAACAGATTG
  TTCAGGAGAA AGAAGAAATA AATCAATAAC AGGTGTGAGT ATCCCAGAAA ATATTACTTC
  AACATAAATT GTCCCTGTAA GAAGGACAGA AAAATGTTTT TACAAACCTT TTACTTTTTT
  CAATTCTCAC TGGAATCCCA TGTCAGAAGA GAAAATGGCT GTTTGCTTAG AATAAAGTGT
  Y
  TTAGCCACCT ACGTGGGCTT GCCTGTAATG GCAAAGCAAG GTGCCGATCA ATATCCATCT
  TCTTCATTCC TGAAGTAATA ACTTTCAATA GGAAAATCTA TTTACTTTTA CTTACCTTTA
  TTTTATTTCA TTTTGCTTTA AAGAAGTTCA TTCCAGGGGG AGGGTTTACC TTGCAAACAG
  CAGTTAACAA ACTGATGATT TAACTGAGGG CTCCAGGCCA GGGGTGGTGT TACTATCTGT
  ATACCTGTGT GACAATGCTA AGAAACATTG CTCGGGACTC TAAGTTCCTT GTTCTAACAA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45507132	mCV24300016	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31187447					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128646206 () rs orientation: forward

Symbol	Name	Function Class
Gm43824	predicted gene 43824	within coordinates
Rr497	regulatory region 497	within coordinates
Rr584947	regulatory region 584947	1692 bp distal