rs31179079 SNP Detail

Summary

• ID
  rs31179079
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76751266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGAGAGC AAGGTCTCAA
  AATCAAGTTC CGAATAGGCG GAGAGGAGAG AGAGGCCTTG GAGAAAGAGT AGCAGTTTTG
  CTCCTGGGAG CTGCAAATCT GTCTATGGAG AAGAATCTGT TTGCTAAGAA TTGGAGGAAA
  GGGAGCCGGG AGCGGATGAG CTAGGGTCTG GGTTGAAGGG GGGCTGTTCC TCTTCACTAG
  R
  CAACCCAGAA GGCTCAAGAT CCCAGAGGCA AGTCAGACTC GGGTGAATAA CGACAATTGG
  AAGTGACAGA GCAAAAATCT GCAGGGGAGG GGCAGGAGAA GGGGAGCGAG AGGGGGGAAG
  GGATTAACTT CCTCTGGGAA GGGTGGGGGT GGGTAGGCTG TAGAGGAATG TGGAGGATTT
  TGACAGAAGG GGTTGGGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39261855	mCV23494537	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss139757425	ENSMUSSNP2290739	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31179079					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76751266 () rs orientation: forward

Symbol	Name	Function Class
4930444M15Rik	RIKEN cDNA 4930444M15 gene	732 bp downstream
E130202H07Rik	RIKEN cDNA E130202H07 gene	1932 bp upstream
Gm63554	predicted gene, 63554	within coordinates
Rr389872	regulatory region 389872	1034 bp upstream
Rr495676	regulatory region 495676	166 bp distal
Rr495677	regulatory region 495677	within coordinates
Tssr129811	transcription start site region 129811	1659 bp downstream
Tssr129812	transcription start site region 129812	1694 bp downstream