rs31150039 SNP Detail

Summary

• ID
  rs31150039
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121439327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGCAATAAG TTCACAATGA ATAGAGAATG GGGGTCACGG
  CAGGGCAGAC TTTCTGGACA ACTATGCACT GAATATAGGG AGAGGGCAGC CAAAGGGTGC
  R
  ACATGGGTGG CTTGTGAGAA CAGCCAGAGG ACAGGCTGGC AGGCCAACTC CGCAAGGAGG
  CTGAGACATG ATGCATTTCA CATAAAGACC TCGGACGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45503972	mCV23896148	ABI	CRAMUS_MOUSE	f	SNP		A	A	G
ss135725835	ENSMUSSNP4219426	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320904499	CHEV_3_121348596	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31150039					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121439327 () rs orientation: forward

Symbol	Name	Function Class
A730020M07Rik	RIKEN cDNA A730020M07 gene	within coordinates
Rr584137	regulatory region 584137	1865 bp distal
Rr584138	regulatory region 584138	within coordinates