rs31089550 SNP Detail

Summary

• ID
  rs31089550
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154429962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTGTGTGT GTGTGTTGTG AACATCAGGT ATTGGATTCA
  GGGAAAACCA ACAGCCAGAA TACCTTCCTC TTGAGCCATC ATTAATGATG TCCCTGAAAT
  M
  TAAACAGTAA CTGGACATGG TCACCCAGAA GTCATGAGTG ATTCTGAACT TCAGTGAGTT
  CAAGGAAACA TTCCATGCCT GGGGAGTTTT CATACCCCA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45495968	mCV22840367	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss136118449	ENSMUSSNP7153207	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31089550					SNP	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154429962 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	678 bp distal
Rr587892	regulatory region 587892	819 bp distal