rs30967043 SNP Detail

Summary

• ID
  rs30967043
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151948292 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GTGTA TGAATGAGGG ATGTACAGGT
  R
  TATGTGGTAT ATATGAGGGA TGAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46462876	mCV25389753	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss148077989	ENSMUSSNP6405024	ENSEMBL	ENSEMBL_Sanger	r	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30967043					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151948292 () rs orientation: reverse

Symbol	Name	Function Class
9230110K08Rik	RIKEN cDNA 9230110K08 gene	524 bp downstream
Cpgi15375	CpG island 15375	890 bp distal
Gm42357	predicted gene, 42357	within coordinates
Gm57065	predicted gene, 57065	285 bp downstream
Rr398891	regulatory region 398891	1803 bp downstream
Rr605653	regulatory region 605653	1595 bp distal
Rr605655	regulatory region 605655	550 bp distal
Tssr40478	transcription start site region 40478	1616 bp downstream
Tssr40479	transcription start site region 40479	1580 bp downstream
Tssr40480	transcription start site region 40480	1164 bp downstream