rs30937471 SNP Detail

Summary

• ID
  rs30937471
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14711888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAAAGAAAA ATCAATGACG TTTCTTTTTC TGTGAAGCAG
  AGAGAAAACC TGCCTTATTA GATGTATTTA ACTTAATTTC CTTCAGGCTT TCAAATTTGT
  K
  AGTCTGTTAG TAGATGTATA TGTAGTGTAC AAAAGAGTTT GGAAAAGTAG CCCAAAGCTT
  CTAAATATTA AGTTGCTACC ACCCACATTT GTTACAGGA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45480442	mCV25445441	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss134615911	ENSMUSSNP4946755	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss320666901	CHEV_3_14646828	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30937471					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14711888 () rs orientation: forward

Symbol	Name	Function Class
Car13	carbonic anhydrase 13	Intron
Rr374549	regulatory region 374549	881 bp upstream
Rr573698	regulatory region 573698	1903 bp proximal
Tssr28415	transcription start site region 28415	1887 bp downstream