rs30896253 SNP Detail

Summary

• ID
  rs30896253
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119353511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCC GGTGCCCTAA GCCCTCAGCC
  W
  GTGACCTTTG CCCATCCTGG ATGTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45974814	mCV24123107	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
ss133588961	ENSMUSSNP768738	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
ss321927784	CHEV_6_119326568	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30896253					SNP	T	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119353511 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adipor2	adiponectin receptor 2			Intron
				Noncoding-Transcript-Variant
Rr637648	regulatory region 637648			1483 bp distal
Rr637649	regulatory region 637649			1317 bp distal
Rr637650	regulatory region 637650			1279 bp distal
Rr637651	regulatory region 637651			1085 bp proximal
Rr637652	regulatory region 637652			1098 bp proximal