rs30878337 SNP Detail

Summary

• ID
  rs30878337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137720445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCATCAAG CTTGGTCTCT
  CGTGATTTCT TGAGTGTCCG CTATTGTCCC AAGGCCTGAG CGAGGGGCTC CTCTTGAAGT
  CTTTCAGTGG TGAGTGAATT TGGTCTGGGA AAGGTGGTTT TCTAGTTTCC TAGTCTAGAT
  AATTTCCCCC TACTATTTCT CAGAGATTCT GGAGTGTCCT GGAGAGAACA GGCAAGGGAA
  Y
  AAGCAGGAGG CATAGTCCTC ACCTCACTTC TGGTCAGAGC AGTGCTCCAC AGTTGTACTT
  ATGGGTTAAG ATTGTTTGGT AAGTTTCAAC TGAATCACTC ATGATGAAAT TGCTGCTCTG
  CAGTGTCTCC TTGAGAACCA TGTGTTTCCA AGTGGCACCA ACCACCCTTG TTCTTTTGAC
  CTCCCACTGC TTCCTCTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	DBA/2J	MOLF/EiJ	WSB/EiJ
ss46993407	NES10878398	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	DBA/2J	MOLF/EiJ	WSB/EiJ
rs30878337					SNP	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46993407	NES10878398	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137720445 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	within coordinates