rs30862718 SNP Detail

Summary

• ID
  rs30862718
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121437032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCATCTTGC GTGAGATACT
  TACGCACCGT GCTGTATCTT CTCCTATGGG GATGGATGCT GTCTTAACTC GCACGTGGTT
  CAGCCTTGCA CGCAGCACGC ACTCAGCTAA AGGGCAAACT CTTGCTGACA TTTTAGAGAT
  AAAGTAGTAG AGATTGCAGT GGGTGAGGAG ACTCGGCAAA GCACACAGCC AGCATCAGGC
  R
  GCGCTGGCTT GGGATGTCTC CCTGGGTTTC TGGCAGGATC AAGTCATTGC AGCAATTGAA
  GTGCACAGAA CTTCCTCTCA CCCTGCTGGG AGACAGCCAG TCCCAGGCAG ACACTCCACA
  AAGCTTTGGC TTGCTGGCCA CAAGGGCATC AAGGACATCG CACCCACAGG AGTCTGGCCT
  TTCACTAATT CATTTCCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45474683	mCV23896162	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss135725819	ENSMUSSNP4530544	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30862718					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121437032 () rs orientation: forward

Symbol	Name	Function Class
A730020M07Rik	RIKEN cDNA A730020M07 gene	within coordinates
Rr584136	regulatory region 584136	within coordinates
Rr584137	regulatory region 584137	12 bp proximal
Rr584138	regulatory region 584138	1942 bp proximal