rs30849669 SNP Detail

Summary

• ID
  rs30849669
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95130401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGCTTCA GACTTTGCTT
  TCCCACCTTA GTCTTGTGCA AGGGTAGACA CACACAGGTG TACACAGGGC ATGCACACCC
  ATGAGACTGT GGAGCAAGGT AAAGGGGGAG GACCTCTGGT GTCCTGCTCT ATCATTATGG
  GTCCTGGTCC CTTGAGACAG GTCTCTCATT GAACCTGGAT CGAGGCTGGT GGCCAACAAG
  Y
  CCAGCAACCC TCTGTCTACA TCCTCCCATA TCGCTGAGGT GACAGATGTG GACAGCCACA
  CCCAGGTTTC TATTTGGCTA CTGAGGATTT GAACTTGGGG TTTTGGTTTG TTTTTTTTTG
  TGTGTGTGTG ACAGGGTTTG TTTTGTTTGT TTGTTGCCCT GGTTGTCTTG GAAACTCATT
  CTGTAGACCA GGCTGGGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45471379	mCV22580264	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss135510254	ENSMUSSNP4889170	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30849669					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95130401 () rs orientation: forward

Symbol	Name	Function Class
Gm16740	predicted gene, 16740	within coordinates
Mllt11	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11	Intron
Rr580859	regulatory region 580859	937 bp distal
Rr580860	regulatory region 580860	383 bp proximal
Rr580861	regulatory region 580861	749 bp proximal
Rr580862	regulatory region 580862	1201 bp proximal