rs30822998 SNP Detail

Summary

• ID
  rs30822998
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116326422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAC TTTCTTTTTT TTTTTTTTTT
  Y
  CTTTCTTTTT CTTTTTCTGG TTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45968865	mCV27550614	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss133575972	ENSMUSSNP84602	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30822998					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116326422 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Marchf8	membrane associated ring-CH-type finger 8			Intron
				mRNA-UTR
Rr637191	regulatory region 637191			1206 bp distal
Rr637192	regulatory region 637192			4 bp proximal
Tssr58369	transcription start site region 58369			1441 bp upstream