rs30810599 SNP Detail

Summary

• ID
  rs30810599
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:101039371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGCTCAAG GTACGTGGCT ATCTTGAGGA ATACGAGGAA
  GTCAAGTGCC AGTCATAAGA CTTGGCAGCA GTCCCGGGCG CCATCTTAGG GCCGAGGCCA
  Y
  GCCCGCTCCT CACATCTGTG AGCAGAGTGT GTGGACAGTT ACCGTTGGCT ACTGCAAATG
  TCAGGGCCAT ATGAACTCAA AGAAGAAGGA ATTATTGGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45967532	mCV23117089	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss133429346	ENSMUSSNP2521930	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321872854	CHEV_6_101012404	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30810599					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:101039371 () rs orientation: forward

Symbol	Name	Function Class
Gm43948	predicted gene, 43948	within coordinates
Gm43950	predicted gene, 43950	within coordinates
Rr635751	regulatory region 635751	1644 bp proximal