rs30796741 SNP Detail

Summary

• ID
  rs30796741
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128646265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTATTTCTAA ATGACTGCCT AGGAGCAGTA TACAAGGGTG ACGGCATTAT AAAACAGATT
  GTTCAGGAGA AAGAAGAAAT AAATCAATAA CAGGTGTGAG TATCCCAGAA AATATTACTT
  CAACATAAAT TGTCCCTGTA AGAAGGACAG AAAAATGTTT TTACAAACCT TTTACTTTTT
  TCAATTCTCA CTGGAATCCC ATGTCAGAAG AGAAAATGGC TGTTTGCTTA GAATAAAGTG
  TCTTAGCCAC CTACGTGGGC TTGCCTGTAA TGGCAAAGCA AGGTGCCGAT CAATATCCAT
  Y
  TTCTTCATTC CTGAAGTAAT AACTTTCAAT AGGAAAATCT ATTTACTTTT ACTTACCTTT
  ATTTTATTTC ATTTTGCTTT AAAGAAGTTC ATTCCAGGGG GAGGGTTTAC CTTGCAAACA
  GCAGTTAACA AACTGATGAT TTAACTGAGG GCTCCAGGCC AGGGGTGGTG TTACTATCTG
  TATACCTGTG TGACAATGCT AAGAAACATT GCTCGGGACT CTAAGTTCCT TGTTCTAACA
  ACAGCCACTA GACACCTCTC AAGGCCCACA CCTTCTTTGC ATAGGAGGTA CAGCAGCAAG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45465136	mCV24300015	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30796741					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128646265 () rs orientation: forward

Symbol	Name	Function Class
Gm43824	predicted gene 43824	within coordinates
Rr497	regulatory region 497	within coordinates
Rr584947	regulatory region 584947	1751 bp distal