rs30730233 SNP Detail

Summary

• ID
  rs30730233
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154428129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCAAAGAAG CTGTAATTGA TTTTCTGGTC TTCTGATAGT
  TCTGCCTCTT GACCCCATTT TCTCAGGGTC CACAAACCAA TCCCATCTTT CTCTTCCCAC
  V
  TGCCTTCTCT CTATAACAAA CCTCTTTCCC AAATAGAGGG CCCTCTTCCT GGGGTATTTA
  CTTGACTCGT GATGATCTCT CTTCTCTCTC CCCACCTAA                       
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss45466062	mCV22840579	ABI	CRAMUS_MOUSE	f	SNP	G	G	A				G	A
ss47477714	NES10331305	PERLEGEN	MM_PANEL2	f	SNP	G			G	C	G			C	G	G
ss136118416	ENSMUSSNP2489153	ENSEMBL	ENSEMBL_Sanger	f	SNP			A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs30730233					SNP	G	G	A	G	C	G	G	A	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47477714	NES10331305	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154428129 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	633 bp proximal
Rr587892	regulatory region 587892	993 bp proximal