rs30724131 SNP Detail

Summary

• ID
  rs30724131
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154426775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCTGTTA GTTTTCCTAA
  CTATATAGGA AATCAAACAG ACTGAGGAGC TGAGAAAGGG TGATGTTGGT GCACATGGAA
  TTATTTTTTT CTTTGAAATC TCTTTCTCCA ATCAAGAAGA GTGACTCTAA TAAAAACAGC
  CACAAATATA ACAACAGATT TGGTGATTAC AAGTTTTAAG CCTCCCCAAT AAACAGTGCC
  R
  CTGGAACATC AGCTTTAAGT TAAAGTAAAA TAAACCATGG CTCTCAGTTT GTGGAGAACT
  GTTATCATTT TTACAGATTT GTGGAATGTG GGAATTCACT CAGGTGTTTC TCAGTCACAT
  CCAGCATTCC TTCCCATCTC TTCGTAGATG AGGGAGGGAA GATGCCCCTG AGCTGGGGTG
  GCTTTTGAAG GATATCCCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45537998	mCV22840812	ABI	CRAMUS_MOUSE	f	SNP		G	A					G
ss47477744	NES10331293	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	A		A	A	A	A	G		A	A	G	A
ss136118374	ENSMUSSNP4044462	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A											G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30724131					SNP	G	G	A	G	A	G	A	G	A	A	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47477744	NES10331293	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154426775 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	1987 bp proximal