rs30724128 SNP Detail

Summary

• ID
  rs30724128
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154426869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATCTCTT TCTCCAATCA
  AGAAGAGTGA CTCTAATAAA AACAGCCACA AATATAACAA CAGATTTGGT GATTACAAGT
  TTTAAGCCTC CCCAATAAAC AGTGCCGCTG GAACATCAGC TTTAAGTTAA AGTAAAATAA
  ACCATGGCTC TCAGTTTGTG GAGAACTGTT ATCATTTTTA CAGATTTGTG GAATGTGGGA
  R
  TTCACTCAGG TGTTTCTCAG TCACATCCAG CATTCCTTCC CATCTCTTCG TAGATGAGGG
  AGGGAAGATG CCCCTGAGCT GGGGTGGCTT TTGAAGGATA TCCCTATAGC TCTGGCTAGG
  TGGGGTGGGG ACTATGGTTC AATGCTACCT CAGCTTTCAG TAGCCAAAGT GCCAACCTTT
  TCCTGAAGGG AAAGGTATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45453171	mCV22840811	ABI	CRAMUS_MOUSE	f	SNP		A	G				A
ss47477741	NES10331294	PERLEGEN	MM_PANEL2	f	SNP	A			A	A	G		G	G	G		G	G	G	G
ss136118377	ENSMUSSNP3426944	ENSEMBL	ENSEMBL_Sanger	f	SNP			G								G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30724128					SNP	A	A	G	A	A	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47477741	NES10331294	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154426869 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	1893 bp proximal