rs30706131 SNP Detail

Summary

• ID
  rs30706131
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100598971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTCA GAGACCATTA ACAAGTCCTT
  Y
  TGGGTTATGG ATCTAGAAAC TAGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
ss45457647	mCV25298228	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss320849198	CHEV_3_100495578	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
rs30706131					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100598971 () rs orientation: forward

Symbol	Name	Function Class
Gm43464	predicted gene 43464	586 bp upstream
Rr581888	regulatory region 581888	11 bp distal
Rr581889	regulatory region 581889	158 bp proximal
Rr581890	regulatory region 581890	397 bp proximal
Rr581891	regulatory region 581891	651 bp proximal
Tssr30881	transcription start site region 30881	786 bp upstream