rs30701543 SNP Detail

Summary

• ID
  rs30701543
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129358016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cctgagtca gagtgggcca ttttcattcg
  aaccaccact actactacta ctactactac tactactact accacttcta ctacttcttc
  ttcttcttct tcttcttctt cttcttcttc ttcttcttct tcttcttctt cttcttcttc
  K
  tcgtcgtcgt cgtcttcttc ttcttcgtct tcttcttcgt cttcttcttc ctcttctgtt
  tgtttgtttg tttgtttgtt tgagacagag tttctctgta tagccctagc tgtcctggaa
  ctcactttgt agaccaagct ggcctcaaac                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45458095	mCV22327749	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss320962502	CHEV_3_129267285	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30701543					SNP	G	G	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129358016 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	Intron
Gm66250	predicted gene, 66250	within coordinates
Rr585032	regulatory region 585032	543 bp proximal
Rr585033	regulatory region 585033	1077 bp proximal