rs30660480 SNP Detail

Summary

• ID
  rs30660480
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:27915329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGACCAGA GACTATAAGG
  ATGACAACTT GGCAGGAAAA AAACAACCTC AGTAATATGG GCATTTTATG TAAAGTTCTG
  TCTCTGTAGG GTTTTTTAGT GCTTCCTGGC CTTATAACAA CTAGAGCTTT TAATACATCT
  TGGGGATAGT GACTCATTTA AAGAAGACAC TTCCCCTCTC CAGGAGAATA GGGGAGAGGT
  K
  GAGGGAGAAG ACGAGGGTTT TGAGCCATCC AGAGGATAGG TATCCATGAC TTTCCCAGAG
  AGCATATCTG TCTTTGCGTG GTTCCCACGA GTAATTGTGG AATAACTCCC TGGAACCCAG
  ATTAGAGGGG CCACCTGGTA CCGCTCAATT GTTGGACAGT TGGTCTGGCA TGATTGGGAC
  AGTCCTTGTA GTGTGTCATC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45453561	mCV24246993	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss134708176	ENSMUSSNP1965577	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30660480					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27915329 () rs orientation: forward

Symbol	Name	Function Class
Gm56777	predicted gene, 56777	1505 bp downstream
Rr574492	regulatory region 574492	1359 bp distal
Rr574493	regulatory region 574493	372 bp proximal
Rr574494	regulatory region 574494	1290 bp proximal