rs30659633 SNP Detail

Summary

• ID
  rs30659633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52661314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC ACACACACAC
  ATACATAGAG TAATGATTTT AAAAAATTAA AGCATTTCGT TAATGTATAC TCTGGGTTTT
  CCTTCTGAAA AAGACAAGAT ATAGCCTCAG CAGTCTAGAG CATGAGACCT GAAGGGCTGG
  TCCTAGAGAG GCTCCTTCAA GCTTTTTGAG CAAACTGCAC TGTTAGCACT AAAGGTAGGT
  R
  TGAGTGTGCA AGCGTGTATG TGAGCGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGCTGCACCC TACCCCACAA CATATTGCTC TGATTATAAA GAGCTACTGT ATTTTTTGCT
  TTGGGAACCA AACTAACTAC CTACTATCTT AGGATATGAA CTTTTATTTC CATGGGATAT
  TTACTCCAAA TGATCATTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45453552	mCV23179626	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss320765061	CHEV_3_52557815	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30659633					SNP	A	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52661314 () rs orientation: forward

Symbol	Name	Function Class
Gm2447	predicted gene 2447	within coordinates
Rr576580	regulatory region 576580	555 bp proximal
Tssr33262	transcription start site region 33262	1152 bp downstream