rs30621246 SNP Detail

Summary

• ID
  rs30621246
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129423185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCTTCCA TCTGGGATTC
  CTAATATTTT TAGTCCAAGA TCAATAATTA TGTGGCTTTA GTGGAACTGA GTTGAATTGT
  GAAATCAGAA GGTACAAATG TTCTTTTTTT TTTTTTTTGT CTTCTTTAAA CAGAGGCGAG
  AGTGTGTAGA TTTATGGGAG ACTTCTCCGG TCTGTTCTGA CACTAGTGTT TTGTAAGCTC
  M
  TCAGAGTTCG TGGTCACACA TCTGTGTAGA TACTGTTCTC TCGAGTGTGT TGGGGGAGCA
  GCTGAGCCAC GTGTCACAAC ATGGTGTAAA TCTACTGCCT TTGAGTAGCT GACAGTTGGA
  TTGATGGCTG TCTTCCTAAG ACAAAGACTA AGGAAGAGTA GCCAAAAGCT CTACCTAAAA
  ACCTTTCCTA TGAGGATCAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46966215	NES10875098	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30621246					SNP	A	A	A	A	C	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46966215	NES10875098	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129423185 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	Intron
Rr585052	regulatory region 585052	1571 bp proximal